Information for 13-TCTAAGGCAGGTC (Motif 28)

A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C
Reverse Opposite:
C A T G T G C A A T G C A G T C A C G T A C T G A T G C A G T C G C A T A G C T C T G A A C T G T C G A
p-value:1e-7
log p-value:-1.636e+01
Information Content per bp:1.688
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif46.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets46.9 +/- 22.1bp
Average Position of motif in Background46.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCTAAGGCAGGTC-
---AAGGCAAGTGT
 A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTAAGGCAGGTC-
-----AACAGGTGT
 A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TCTAAGGCAGGTC---
------VCAGGTRDRY
 A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCTAAGGCAGGTC---
----SDGCAGGTGCNS
 A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTAAGGCAGGTC
AGCCTCAGGCA----
 A C G T A C G T A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTAAGGCAGGTC
AGCCTCAGGCA----
 A C G T A C G T A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCTAAGGCAGGTC--
-----NNCAGGTGNN
 A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTAAGGCAGGTC--
-----GACAGGTGTN
 A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTAAGGCAGGTC
CGCCTCAGGCA----
 A C G T A C G T A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTAAGGCAGGTC---
GGATTGACAGGTCNTT
 A C G T G T A C G A C T T C G A C G T A C T A G A T C G G T A C C G T A C T A G A T C G A C G T G T A C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T