Information for 13-TCTGYYAGTC (Motif 27)

G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C
Reverse Opposite:
C T A G C G T A A T G C C G A T C T G A T C G A A T G C C G T A T C A G C T G A
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.551
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif147.8
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets44.1 +/- 31.3bp
Average Position of motif in Background50.7 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TCTGYYAGTC--
NCTGTCAATCAN
 G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TCTGYYAGTC-
GSCTGTCACTCA
 A C G T G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCTGYYAGTC--
SCTGTCAVTCAV
 G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C A C G T A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCTGYYAGTC-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTGYYAGTC
GCTGTCAA--
 G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTGYYAGTC
VGCTGWCAVB-
 A C G T G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCTGYYAGTC-
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTGYYAGTC
TGTCTGDCACCT
 A C G T A C G T G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGYYAGTC--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCTGYYAGTC-
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T G A C T A G T C G C A T T A C G A G C T G A C T G C T A T A C G G C A T G A T C A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C