Information for 11-CAATGGTATCACA (Motif 23)

A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T C T A G C G T A C A G T C T G A G T A C G T A C C G T A C A G T A C G T A T C G
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.728
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif137.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets51.9 +/- 25.0bp
Average Position of motif in Background50.1 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAATGGTATCACA---
AATAGGGTATCATATAT
 A C G T A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAATGGTATCACA
---TGGTTTCAGT
 A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAATGGTATCACA---
GATAGGGTATCACTAAT
 A C G T A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAATGGTATCACA---
GATAGGGTATCACTAAT
 A C G T A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAATGGTATCACA-
----KTTCACACCT
 A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAATGGTATCACA
--AATGTATCAAT
 A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAATGGTATCACA---
GATGGGGTATCATTTTT
 A C G T A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAATGGTATCACA---
AATGGGGTATCACGTTT
 A C G T A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAATGGTATCACA---
TNNNNGGTGTCATNTNT
 A C G T A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAATGGTATCACA-------
---NNTTTTCACACCTTNNN
 A T G C G T C A G C T A C G A T C A T G A C T G A G C T G C T A C G A T A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C