Information for 12-CATTGCSAAAGTCAAC (Motif 15)

A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C
Reverse Opposite:
A T C G G C A T A C G T A T C G C T G A A G T C A C G T G A C T A C G T A T C G A C T G A G T C C G T A G T C A A C G T A T C G
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.728
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 22.1bp
Average Position of motif in Background33.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:CATTGCSAAAGTCAAC
------AAAAGTCAA-
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATTGCSAAAGTCAAC---
---TGCCAAAATAAACANN
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CATTGCSAAAGTCAAC---
---GGCAAAAGTCCAATAA
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CATTGCSAAAGTCAAC-
-----NCTAAGTAAACA
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CATTGCSAAAGTCAAC-
-------AAAGTAAACA
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CATTGCSAAAGTCAAC----
-----NCWRWGTAAACANSV
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CATTGCSAAAGTCAAC-
-------AAAGTAAACA
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CATTGCSAAAGTCAAC---
-------TATGTAAACANG
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CATTGCSAAAGTCAAC
-----TCAAGGTCAT-
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CATTGCSAAAGTCAAC-----
------CAAAGTAAACANNNN
 A T G C C G T A C A G T A C G T A C T G T A G C T A G C C G T A C T G A C G T A C T A G G A C T A T G C C G T A C G T A T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A