Information for 1-STGAGGCCWA (Motif 6)

T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A
Reverse Opposite:
C G A T G C T A T A C G A T C G T G A C A G T C G A C T A T G C G T C A A T G C
p-value:1e-9
log p-value:-2.303e+01
Information Content per bp:1.626
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif11.60%
Number of Background Sequences with motif2733.1
Percentage of Background Sequences with motif5.65%
Average Position of motif in Targets49.0 +/- 25.6bp
Average Position of motif in Background50.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:STGAGGCCWA-
---AGGCCTNG
 T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:STGAGGCCWA-
---AGGCCTAG
 T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:STGAGGCCWA------
--CAGGCCNNGGCCNN
 T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--STGAGGCCWA
SCCTSAGGSCAW
 A C G T A C G T T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:STGAGGCCWA--
--GAGSCCGAGC
 T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----STGAGGCCWA
ATGCCCTGAGGC---
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----STGAGGCCWA
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---STGAGGCCWA
NGCCTGAGGCN--
 A C G T A C G T A C G T T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---STGAGGCCWA
TGCCTGAGGCN--
 A C G T A C G T A C G T T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---STGAGGCCWA
NGCCTNAGGCN--
 A C G T A C G T A C G T T A C G A C G T A T C G C T G A C T A G A C T G A T G C A T G C C G A T G C T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T