Information for 5-AACAAGCACATTACAA (Motif 13)

C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
Reverse Opposite:
A C G T C A G T A C T G A C G T C G T A C G T A C G A T A C T G A G C T A T C G A G T C C G A T A C G T A T C G A C G T A C G T
p-value:1e-8
log p-value:-1.845e+01
Information Content per bp:1.765
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.8 +/- 29.8bp
Average Position of motif in Background42.8 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AACAAGCACATTACAA
AGAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:2
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AACAAGCACATTACAA
AATAAAGAACAATAGAATTTCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AACAAGCACATTACAA----
-----AAAAATAACAAACGG
 C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AACAAGCACATTACAA
ATAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AACAAGCACATTACAA
AAAAACCAATTAAGAA
 C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AACAAGCACATTACAA
AATGAACAATGGAATT----
 A C G T A C G T A C G T A C G T C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AACAAGCACATTACAA
NNNTAACAATTATAN-----
 A C G T A C G T A C G T A C G T C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AACAAGCACATTACAA-
CATAACCACTTAACAAC
 C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AACAAGCACATTACAA
AACAAT----------
 C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AACAAGCACATTACAA
CAAACAACAACACCT---
 A C G T A C G T C G T A C G T A A T G C C G T A C G T A T A C G T A G C C T G A G T A C C G T A A C G T G A C T C G T A A G T C G C T A C G T A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T