Information for 5-TCAAGATTCATCT (Motif 10)

A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G A T A C T G G T C A C G T A A C G T A T G C C G A T A C G T A T C G C G T A
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 29.7bp
Average Position of motif in Background51.8 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCAAGATTCATCT
-GAATATTCAT--
 A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCAAGATTCATCT
CTCATGAATATTCAT--
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAAGATTCATCT
-CATGACTCATC-
 A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T
A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCAAGATTCATCT-
TTCTAGAABNTTCTA
 A C G T A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCAAGATTCATCT-
--GYCATCMATCAT
 A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

HSF4/MA0771.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCAAGATTCATCT
TTCTAGAACGTTC-
 A C G T A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCAAGATTCATCT----
---ACATTCATGACACG
 A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCAAGATTCATCT
--ATGAGTCAT--
 A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCAAGATTCATCT--
NNANTGATTGATNTTN
 A C G T A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCAAGATTCATCT--
NNANTGATTGATNNNN
 A C G T A C G T A T G C C G T A C G T A A T C G C G T A A C G T A C G T G T A C C G T A A C G T A G T C A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C