Information for 16-TTCHGGTBATGAA (Motif 31)

A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C G T T A C G C G T A A G T C A G T C C T A G A C T G C G T A G T C A
p-value:1e-6
log p-value:-1.596e+01
Information Content per bp:1.826
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.2 +/- 26.8bp
Average Position of motif in Background42.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTCHGGTBATGAA---
--NNTNTCATGAATGT
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTCHGGTBATGAA----
-TAAGGTAATAAAATTA
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTCHGGTBATGAA----
-GGAGGTCATTAATTAT
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCHGGTBATGAA----
-AAAGGTAATAAAATTT
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTCHGGTBATGAA--
----GGTAATAAAAA
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TTCHGGTBATGAA-
----AGTAATTAAC
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTCHGGTBATGAA
-----GTCATN--
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTCHGGTBATGAA-----
-TNAGNTGATCAACCGGT
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCHGGTBATGAA----
-TAAAGTCGTAAAACGT
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TTCHGGTBATGAA--
-----GTCATAAAAN
 A C G T A C G T T G A C G A T C C T A G A C T G A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T