Information for 14-TGATTTATCATTC (Motif 27)

A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
Reverse Opposite:
C T A G C G T A C T G A A C G T A C T G C G T A A G C T C G T A C G T A C G T A A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.849e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.7 +/- 30.5bp
Average Position of motif in Background44.5 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGATTTATCATTC
TGATTGATGA---
 A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGATTTATCATTC
TNNNATGATTTCNNCNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGATTTATCATTC--
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGATTTATCATTC
NNANTGATTGATNTTN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGATTTATCATTC
TGATTTATGGC--
 A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGATTTATCATTC
CTCATGAATATTCAT--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGATTTATCATTC
-GAATATTCAT--
 A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGATTTATCATTC
CNGTGATTTN------
 A C G T A C G T A C G T A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGATTTATCATTC
NNGGTGACTCATCANN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGATTTATCATTC
TGAATTATGCAT-
 A C G T A C T G C G T A C G A T A C G T C G A T T C G A A C G T A G T C G T C A A G C T A C G T A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T