Information for 5-CCTGGAAATTCCC (Motif 6)

G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
Reverse Opposite:
C T A G A C T G T A C G C G T A C G T A A C G T C G A T A G C T G T A C A G T C C G T A A C T G A C T G
p-value:1e-14
log p-value:-3.273e+01
Information Content per bp:1.826
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 17.0bp
Average Position of motif in Background49.9 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.78
Offset:3
Orientation:forward strand
Alignment:CCTGGAAATTCCC
---GGAAATTCCC
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCTGGAAATTCCC
---GGAAATTCCC
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCTGGAAATTCCC
---GGAAATCCCC
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTGGAAATTCCC-
--GGGAAATCCCCN
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTGGAAATTCCC
--GGGGATTTCC-
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCCC
CSTGGGAAAD---
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCCC
NATGGAAAAN---
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCCC
AATGGAAAAT---
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGAAATTCCC
TTTCCTGGAAAGNNN-
 A C G T A C G T A C G T G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCCC
AATGGAAAAT---
 G T A C G T A C A C G T A C T G A C T G C T G A C G T A C G T A C G A T A C G T A T G C G T A C A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T