Information for 12-GCTGCGCGGA (Motif 27)

C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
Reverse Opposite:
C G A T G A T C G T A C A C T G T A G C A T C G T A G C C G T A T C A G G A T C
p-value:1e-7
log p-value:-1.645e+01
Information Content per bp:1.672
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif849.4
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets47.6 +/- 24.0bp
Average Position of motif in Background50.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCTGCGCGGA
NNGCNCTGCGCGGC
 A C G T A C G T A C G T A C G T C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCGCGGA
NGCTN------
 A C G T C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCGGA
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCGGA
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTGCGCGGA
GCTGTG----
 C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTGCGCGGA
CGCAGCTGCG----
 A C G T A C G T A C G T A C G T C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTGCGCGGA
GCTCCG----
 C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCGGA
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTGCGCGGA
-CTGCCCGCA
 C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCGCGGA----
KGTTGCTAGGMAACA
 A C G T C T A G A G T C C G A T A T C G T A G C A T C G T G A C C A T G C T A G G C T A A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A