Information for 17-ACACAVTGGCAAGGAG (Motif 24)

T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
Reverse Opposite:
A T G C G A C T A T G C T A G C A C G T A C G T A C T G A T G C G T A C G C T A A C G T A C G T A C T G A C G T T A C G A C G T
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.710
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 22.0bp
Average Position of motif in Background45.6 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACACAVTGGCAAGGAG
CTCACACAATGGCGC----
 A C G T A C G T A C G T T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACACAVTGGCAAGGAG
RAACAATGGN------
 T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACACAVTGGCAAGGAG
VRAACAATGG-------
 A C G T T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACACAVTGGCAAGGAG
-GACAATGNN------
 T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACACAVTGGCAAGGAG
GAAAAAATTGCAAGG--
 A C G T T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACACAVTGGCAAGGAG
ATGTACAGTAGCAAAG--
 A C G T A C G T T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACACAVTGGCAAGGAG
GAACAATGG-------
 T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACACAVTGGCAAGGAG
AAAACAATGG-------
 A C G T T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACACAVTGGCAAGGAG
ATTTACAGTAGCAAAA--
 A C G T A C G T T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACACAVTGGCAAGGAG
-AACAAAGG-------
 T C G A A T G C C G T A G T A C C G T A T G C A C G A T C A T G A T C G T G A C G T C A C G T A A C T G A T C G C G T A T A C G
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T