Information for 8-TTGGCTTGGC (Motif 9)

A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C C T G A C T G A T C A G A G T C A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.844
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif52.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets54.7 +/- 32.4bp
Average Position of motif in Background53.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TTGGCTTGGC---
----NTTGGCANN
 A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TTGGCTTGGC-
-----TTGGCA
 A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TTGGCTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCTTGGC
TGATTGGCTANN-
 A C G T A C G T A C G T A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTGGCTTGGC---
---NNTTGGCANN
 A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGGCTTGGC
TGGGTGTGGC
 A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCTTGGC
RGTGGGYGTGGC
 A C G T A C G T A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTTGGC
CCGATTGGCT----
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTTGGC-----
NGTAGGTTGGCATNNN
 A C G T A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGGCTTGGC-
MKGGGYGTGGCC
 A C G T A C G T C G A T C T A G A C T G A G T C G A C T G A C T A C T G A C T G A G T C A C G T
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C