Information for 8-CTCTTKKTCCTTC (Motif 8)

A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C
Reverse Opposite:
A T C G C G T A C G T A C T A G A C T G C G T A T G C A G T A C C G T A C G T A A C T G C G T A A C T G
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 32.0bp
Average Position of motif in Background66.6 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CTCTTKKTCCTTC
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCTTKKTCCTTC
-YCTTTGTTCC--
 A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTTKKTCCTTC--
NTNTTGTTGTTTGTN
 A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

ZNF263/MA0528.1/Jaspar

Match Rank:4
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------CTCTTKKTCCTTC
TCCTCCTCCCCCTCCTCCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCTTKKTCCTTC
-CCTTTGTTTT--
 A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CTCTTKKTCCTTC-
--------GCTTCC
 A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCTTKKTCCTTC-
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCTTKKTCCTTC
-CCATTGTTTT--
 A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTCTTKKTCCTTC-
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTKKTCCTTC-
TCACTTTCACTTTCN
 A C G T A G T C A C G T A G T C A C G T A C G T A C T G A C G T C G A T A G T C A G T C A C G T A C G T A T G C A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T