Information for 5-WGCMMAAATARAT (Motif 5)

C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T
Reverse Opposite:
G C T A A C G T A G C T A C G T C G T A C G A T A G C T A C G T A C T G A C T G A T C G A T G C C G T A
p-value:1e-13
log p-value:-3.157e+01
Information Content per bp:1.772
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif63.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets43.7 +/- 24.5bp
Average Position of motif in Background54.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:WGCMMAAATARAT---
TGCCAAAATAAACANN
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--WGCMMAAATARAT
ATGCTAAAAATAGAA
 A C G T A C G T C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:WGCMMAAATARAT
DCYAAAAATAGM-
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WGCMMAAATARAT-
AGCCGAAAAAAAAAT
 A C G T C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:WGCMMAAATARAT
KCCAAAAATAGC-
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WGCMMAAATARAT
-CCAAAAATAG--
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:WGCMMAAATARAT-
----CCAATAAAAA
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:WGCMMAAATARAT---
--AAAAAATCGATAAT
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:WGCMMAAATARAT---
--AAAAAATCGATAAT
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:WGCMMAAATARAT---
--AAAAAATCAATAAT
 C G A T A T C G T A G C G T A C G T A C C G T A C T G A C G T A A C G T C G T A C T G A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T