Information for 3-GTGGTAACTACCACTC (Motif 3)

A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C
Reverse Opposite:
C T A G C G T A A C T G C G A T A C T G A C T G C G A T C G T A C A T G C G A T C A G T C G T A A G T C G T A C C G T A G T A C
p-value:1e-16
log p-value:-3.748e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.9 +/- 23.8bp
Average Position of motif in Background28.0 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GTGGTAACTACCACTC--
------NWAACCACADNN
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PH0053.1_Hoxa6/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTGGTAACTACCACTC
AAGGTAATTACCTAAT
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0061.1_Hoxb6/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGGTAACTACCACTC
TATTGGTAATTACCTT--
 A C G T A C G T A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GTGGTAACTACCACTC-
-------AAACCACANN
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GTGGTAACTACCACTC--
--------MRSCACTYAA
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Hoxb5/MA0904.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTGGTAACTACCACTC
ACGGTAATTAGCTCAT
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0060.1_Hoxb5/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTGGTAACTACCACTC
ACGGTAATTAGCTCAT
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GTGGTAACTACCACTC-
-------AAACCACAGC
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PH0049.1_Hoxa2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTGGTAACTACCACTC
AAGGTAATTAGCTCAT
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GTGGTAACTACCACTC
------NAAACCACAG
 A C T G C G A T A C T G A C T G C G A T G T C A C G T A G T A C C G A T C G T A A G T C A G T C C G T A T G A C C G A T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G