Information for 13-CTGGTCAGGC (Motif 26)

A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G C G T A A G T C A T G C C G T A A C T G
p-value:1e-7
log p-value:-1.696e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 24.3bp
Average Position of motif in Background49.3 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGGTCAGGC
--AGTCACGC
 A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTGGTCAGGC-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGGTCAGGC
WDNCTGGGCA---
 A C G T A C G T A C G T A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGGTCAGGC
-AGGTCA---
 A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGGTCAGGC--
--GGTCTGGCAT
 A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTGGTCAGGC-
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0108.1_Atf1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTCAGGC
NTTATTCGTCATNC
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGTCAGGC
---GTCATN-
 A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGGTCAGGC---------
--CGTCACGCATGACTGCA
 A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGGTCAGGC-------
---GTCACGCTCNCTGA
 A G T C A C G T A T C G A C T G A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A