Information for 12-TAAACTCTTT (Motif 25)

A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T
Reverse Opposite:
G T C A C G T A C T G A A T C G C T G A A T C G C A G T C G A T A C G T C G T A
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.785
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif161.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets43.3 +/- 27.3bp
Average Position of motif in Background51.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAAACTCTTT
CTAATCCTCTT
 A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAAACTCTTT--
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAAACTCTTT
AATAAACAATN-
 A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAAACTCTTT--
CNATAATCCGNTTNT
 A C G T A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

PH0125.1_Obox5_2/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TAAACTCTTT-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAAACTCTTT
GCTAAACGGT--
 A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TAAACTCTTT--
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TAAACTCTTT------
NNNACCTCATTATCNTN
 A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TAAACTCTTT
NYTAATCCYB--
 A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TAAACTCTTT-
AATCGTTAATCCCTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A G T C A A T G C A G C T A T G C A G C T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C