Information for 18-TCATAAGGTCACA (Motif 20)

A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C G T G T C A A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 24.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TCATAAGGTCACA
----AAGGTCAC-
 A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TCATAAGGTCACA
AAGGTCAAAAGGTCAA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A A C G T

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TCATAAGGTCACA
AAAGGTCAAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TCATAAGGTCACA
GAGGTCAAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCATAAGGTCACA
---TRAGGTCA--
 A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCATAAGGTCACA-
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCATAAGGTCACA
--TCAAGGTCAN-
 A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCATAAGGTCACA--
TCTCAAAGGTCACCTG
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCATAAGGTCACA
--TCAAGGTCAT-
 A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCATAAGGTCACA--
TCTCAAAGGTCACGAG
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A T G C C G T A A T G C C G T A A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G