Information for 15-AWGCATGTCTCCW (Motif 17)

C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A
Reverse Opposite:
C G A T C A T G A C T G G T C A A T C G C T G A A G T C C G T A C G A T C T A G A G T C C G A T A C G T
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.762
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets43.2 +/- 18.8bp
Average Position of motif in Background54.9 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AWGCATGTCTCCW
AAGCTTG------
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AWGCATGTCTCCW
----ATGACTCAT
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A
A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AWGCATGTCTCCW-
---CATGACTCATC
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A A C G T
A C G T A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AWGCATGTCTCCW-
--GGATGACTCATC
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A A C G T
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AWGCATGTCTCCW----
ATAAATGACACCTATCA
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AWGCATGTCTCCW
GTCATGCHTGRCTGS-
 A C G T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AWGCATGTCTCCW
GCAGCCAAGCGTGACN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T A C G T A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AWGCATGTCTCCW-
----ATGASTCATH
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AWGCATGTCTCCW-
----ATGACTCATC
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AWGCATGTCTCCW-
---NATGAGTCACN
 C G T A C G T A A C T G G A T C C G T A A C G T A C T G G A C T A T G C A C G T T A G C G T A C C G T A A C G T
A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C