Information for 13-TTGCAGTAGAATT (Motif 13)

A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
Reverse Opposite:
G T C A C G T A A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C T G A G T C C G T A C G T A
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 25.6bp
Average Position of motif in Background74.6 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGCAGTAGAATT
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGCAGTAGAATT
ATTTGCATAACAATG
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAGTAGAATT
ATTTGCATAACAAAG
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGCAGTAGAATT
TTGCAACATN---
 A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTGCAGTAGAATT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTGCAGTAGAATT---
AATGCAATAAAATTTAT
 A C G T A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAGTAGAATT
ATTGCATCAK----
 A C G T A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTGCAGTAGAATT
ATTGCACAATA---
 A C G T A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTGCAGTAGAATT
-TTCCKNAGAA--
 A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T
A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGCAGTAGAATT--
-NNCNNAACAATTNT
 A C G T A C G T C T A G A G T C C G T A C T A G A G C T C G T A C T A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T