Information for 10-GAASAWTGSCAGR (Motif 10)

A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T G C A G T C C T G A C G T A A C G T A T C G A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.547e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 22.4bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAASAWTGSCAGR
GAACAATGGN---
 A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAASAWTGSCAGR-
TGACANARRCCAGRC
 A C G T A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAASAWTGSCAGR
VRAACAATGG----
 A C G T A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAASAWTGSCAGR
RAACAATGGN---
 A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GAASAWTGSCAGR
-----TTGCCAAG
 A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAASAWTGSCAGR
GAACAATGG----
 A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAASAWTGSCAGR-----
-GATATTGACAGCTGCGT
 A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAASAWTGSCAGR-----
--NNATTGACAGGTGCTT
 A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAASAWTGSCAGR---
GAACAATTGCAGTGTT
 A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G A C G T A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAASAWTGSCAGR
AAAACAATGG----
 A C G T A C T G C G T A G T C A A T G C C G T A C G A T A G C T A C T G A T C G A G T C C G T A A C T G C T A G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T