Information for 13-GGGTTTTTAA (Motif 15)

T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A
Reverse Opposite:
A C G T G A C T G T C A G T C A C G T A T G C A G C T A T A G C T A G C A G T C
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.681
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.88%
Number of Background Sequences with motif1354.7
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets51.2 +/- 30.1bp
Average Position of motif in Background50.2 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGTTTTTAA--
---ATTTGAATT
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTTAA-----
NNNTTTNTAATACNG
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGGTTTTTAA----
----TTTGAAACCG
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTTTTAA--
NNNNNNCTTTTATAN
 A C G T A C G T A C G T T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTTTTAA--
NNNNNNCTTTTATAN
 A C G T A C G T A C G T T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTTAA------
NNANTTTTATTGGNNN
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGTTTTTAA---
---NTTTTATTGG
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGTTTTTAA---
---TTTTTATTGG
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGGTTTTTAA----
----TTTTATTRGN
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGGTTTTTAA-
-----TTTAAT
 T C A G A T C G A T C G C G A T A C G T C G A T C A G T C A G T C T G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T