Motif 13

Information for 8-CGGCCCCGCCTCC (Motif 13)

Reverse Opposite:

p-value:	1e-9
log p-value:	-2.085e+01
Information Content per bp:	1.896
Number of Target Sequences with motif	11.0
Percentage of Target Sequences with motif	1.38%
Number of Background Sequences with motif	47.5
Percentage of Background Sequences with motif	0.10%
Average Position of motif in Targets	56.1 +/- 21.9bp
Average Position of motif in Background	42.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)	0.8
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.87
Offset:	1
Orientation:	forward strand
Alignment:	CGGCCCCGCCTCC -GGCCCCGCCCCC

SP2/MA0516.1/Jaspar

Match Rank:	2
Score:	0.84
Offset:	2
Orientation:	forward strand
Alignment:	CGGCCCCGCCTCC---- --GCCCCGCCCCCTCCC

SP1/MA0079.3/Jaspar

Match Rank:	3
Score:	0.83
Offset:	2
Orientation:	forward strand
Alignment:	CGGCCCCGCCTCC --GCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:	4
Score:	0.82
Offset:	0
Orientation:	reverse strand
Alignment:	CGGCCCCGCCTCC- NAGCCCCGCCCCCN

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	5
Score:	0.77
Offset:	2
Orientation:	reverse strand
Alignment:	CGGCCCCGCCTCC- --GCTCCGCCCMCY

EGR1/MA0162.2/Jaspar

Match Rank:	6
Score:	0.73
Offset:	2
Orientation:	forward strand
Alignment:	CGGCCCCGCCTCC--- --CCCCCGCCCCCGCC

KLF16/MA0741.1/Jaspar

Match Rank:	7
Score:	0.73
Offset:	2
Orientation:	forward strand
Alignment:	CGGCCCCGCCTCC --GCCACGCCCCC

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:	8
Score:	0.72
Offset:	2
Orientation:	reverse strand
Alignment:	CGGCCCCGCCTCC- --GCCMCGCCCMCY

PB0076.1_Sp4_1/Jaspar

Match Rank:	9
Score:	0.72
Offset:	1
Orientation:	forward strand
Alignment:	CGGCCCCGCCTCC----- -GGTCCCGCCCCCTTCTC

PB0039.1_Klf7_1/Jaspar

Match Rank:	10
Score:	0.71
Offset:	-1
Orientation:	forward strand
Alignment:	-CGGCCCCGCCTCC-- TCGACCCCGCCCCTAT