Information for 3-TTWYAGTCWGATY (Motif 3)

A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T
Reverse Opposite:
C T G A C G T A A C G T A G T C C G T A A C T G C G T A G T A C A C G T C T A G C G T A C G T A C G T A
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 20.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTWYAGTCWGATY--
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTWYAGTCWGATY-
CTTTCANTATGACTV
 A C G T A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTWYAGTCWGATY--
---TAATCHGATTAC
 A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTWYAGTCWGATY
---TWGTCTGV--
 A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTWYAGTCWGATY
NCGTATTATAATCNTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TTWYAGTCWGATY
---CTGTCTGG--
 A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTWYAGTCWGATY--
-----CNGTGATTTN
 A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TTWYAGTCWGATY
TGGTTTCAGT------
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TTWYAGTCWGATY
--TGAGTCATTTC
 A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T
A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TTWYAGTCWGATY--
---TAATYNRATTAR
 A C G T A C G T C G A T A G T C C G T A A C T G A C G T A G T C C G A T A C T G C G T A C G A T A G C T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G