Information for 9-AGTGGTGTAA (Motif 13)

C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A A T G C G T C A A G T C A G T C C G T A A G T C A C G T
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.916
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets68.2 +/- 25.9bp
Average Position of motif in Background53.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTGGTGTAA---
-GTGGCGTGACNG
 C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGTGGTGTAA
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGTGGTGTAA
NATGTTGCAA
 C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGTGGTGTAA-
-ATGGGGTGAT
 C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGTGTAA
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGGTGTAA-
-ATGATGCAAT
 C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGTGTAA
TTAAGTGGT----
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTGGTGTAA-
-MTGATGCAAT
 C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTGGTGTAA
-GTGGAT---
 C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGTGGTGTAA-
-RTTATGYAAB
 C G T A A C T G A C G T A C T G A C T G A C G T A T C G G A C T C G T A C G T A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C