Information for 4-GAGGGCGCTGTCT (Motif 4)

A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T
Reverse Opposite:
T C G A C T A G C G T A A T G C C G T A A C T G A G T C T A C G A G T C A G T C A G T C A C G T A G T C
p-value:1e-15
log p-value:-3.678e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 22.7bp
Average Position of motif in Background44.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf12/MA0742.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCGCTGTCT
NANAAGGGCGTGGTC-
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGCTGTCT-
NNAGGGGCGGGGTNNA
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGCTGTCT
NNVDGGGYGGGGCYN
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGGCGCTGTCT-----
-AAGACGCTGTAAAGCGA
 A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGGCGCTGTCT-----
-AAGACGCTGTAAAGCGA
 A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGGCGCTGTCT-----
-AGGACGCTGTAAAGGGA
 A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCGCTGTCT
ANTGCGGGGGCGGN--
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGGCGCTGTCT
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAGGGCGCTGTCT
TGCGTGGGYG------
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAGGGCGCTGTCT
------GCTGTG-
 A C T G C G T A A C T G A C T G A C T G A G T C A C T G G T A C A C G T A T C G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T