Motif 24

Information for 17-TGKCACGTGACMT (Motif 24)

Reverse Opposite:

p-value:	1e-8
log p-value:	-1.864e+01
Information Content per bp:	1.628
Number of Target Sequences with motif	41.0
Percentage of Target Sequences with motif	4.54%
Number of Background Sequences with motif	765.4
Percentage of Background Sequences with motif	1.62%
Average Position of motif in Targets	47.7 +/- 26.2bp
Average Position of motif in Background	51.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)	-0.4
Multiplicity (# of sites on avg that occur together)	1.05
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

BHLHE41/MA0636.1/Jaspar

Match Rank:	1
Score:	0.87
Offset:	1
Orientation:	reverse strand
Alignment:	TGKCACGTGACMT -GTCACGTGAC--

USF1/MA0093.2/Jaspar

Match Rank:	2
Score:	0.84
Offset:	1
Orientation:	forward strand
Alignment:	TGKCACGTGACMT -GCCACGTGACC-

USF2/MA0526.1/Jaspar

Match Rank:	3
Score:	0.84
Offset:	1
Orientation:	forward strand
Alignment:	TGKCACGTGACMT -GTCATGTGACC-

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:	4
Score:	0.84
Offset:	-1
Orientation:	reverse strand
Alignment:	-TGKCACGTGACMT BRGTCACGTGAC--

TFEB/MA0692.1/Jaspar

Match Rank:	5
Score:	0.83
Offset:	1
Orientation:	reverse strand
Alignment:	TGKCACGTGACMT -GTCACGTGAT--

BHLHE40/MA0464.2/Jaspar

Match Rank:	6
Score:	0.82
Offset:	1
Orientation:	reverse strand
Alignment:	TGKCACGTGACMT -GTCACGTGAN--

Arntl/MA0603.1/Jaspar

Match Rank:	7
Score:	0.82
Offset:	2
Orientation:	reverse strand
Alignment:	TGKCACGTGACMT --NCACGTGACN-

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:	8
Score:	0.81
Offset:	2
Orientation:	reverse strand
Alignment:	TGKCACGTGACMT --TCACGTGACC-

HES5/MA0821.1/Jaspar

Match Rank:	9
Score:	0.81
Offset:	0
Orientation:	reverse strand
Alignment:	TGKCACGTGACMT TGGCACGTGCCG-

HEY2/MA0649.1/Jaspar

Match Rank:	10
Score:	0.81
Offset:	1
Orientation:	forward strand
Alignment:	TGKCACGTGACMT -GACACGTGCC--