Information for 13-GAGGGABGTGTGG (Motif 19)

A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A G T A C C G T A A G T C T C G A A C G T A G T C A G T C A G T C A C G T A T G C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.890
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.0 +/- 21.2bp
Average Position of motif in Background45.8 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAGGGABGTGTGG-
--GGGAATTGTAGT
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G A C G T
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGGABGTGTGG----
-GCGGAGGTGTCGCCTC
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGGABGTGTGG
AAGGCAAGTGT--
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGGGABGTGTGG--
---GGGGGTGTGTCC
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGGGABGTGTGG-----
-NNTNNTGTCTGGNNTNG
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAGGGABGTGTGG----
-----NNHTGTGGTTWN
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGGGABGTGTGG
-----AGGTGTGA
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGGGABGTGTGG
-----AGGTGTGA
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGGGABGTGTGG
NTGGAATGTG---
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGGGABGTGTGG
---VBSYGTCTGG
 A T C G C G T A A C T G A C T G A C T G C G T A A G C T A C T G A C G T C A T G A C G T A C T G A C T G
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G