Information for 5-TGGGGAGCTGTCCANG (Motif 4)

G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G
Reverse Opposite:
A G T C C G T A A C G T A T C G A T C G G C T A G T A C C G T A A T C G A G T C A C G T A G T C A G T C T A G C A T G C C T G A
p-value:1e-14
log p-value:-3.323e+01
Information Content per bp:1.729
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.4 +/- 22.3bp
Average Position of motif in Background45.1 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGGGGAGCTGTCCANG-------
---GGAGCTGTCCATGGTGCTGA
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGGGGAGCTGTCCANG--------
---GGCGCTGTCCATGGTGCTGAA
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGGGAGCTGTCCANG-
--GGGCGATGACCAYTC
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G A C G T
A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGGGAGCTGTCCANG
-GGGGGTGTGTCC---
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGGGAGCTGTCCANG
TGGGGA----------
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGGGAGCTGTCCANG-
-GCGGAGGTGTCGCCTC
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TGGGGAGCTGTCCANG-
-------CTGTTCCTGG
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGGGGAGCTGTCCANG---
---GGGTGTGCCCAAAAGG
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGGGGAGCTGTCCANG-
-AAAGACCTGTCAATCC
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G A C G T
A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TGGGGAGCTGTCCANG
---GGGAATTTCC---
 G A C T A T C G A C T G C T A G A C T G G T C A C T A G T A G C A C G T A C T G C G A T A T G C A T G C G T C A G C A T A C T G
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T