Information for 2-AATATTTRCWTTD (Motif 2)

C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
Reverse Opposite:
G C T A C G T A G C T A C G T A C T A G A G C T G T C A C G T A C G T A A G C T C G T A A G C T A G C T
p-value:1e-29
log p-value:-6.822e+01
Information Content per bp:1.616
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif11.43%
Number of Background Sequences with motif1403.6
Percentage of Background Sequences with motif2.97%
Average Position of motif in Targets52.8 +/- 25.6bp
Average Position of motif in Background49.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.93
Offset:2
Orientation:forward strand
Alignment:AATATTTRCWTTD
--TRTTTACTTW-
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:AATATTTRCWTTD
-ATATTTACATA-
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:AATATTTRCWTTD
-ATATTTACATA-
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AATATTTRCWTTD-
BSNTGTTTACWYWGN
 A C G T C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AATATTTRCWTTD
TTTGTTTACTTA-
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:AATATTTRCWTTD
--TGTTTACTTT-
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:AATATTTRCWTTD
--TGTTTACTTT-
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AATATTTRCWTTD
TCCATGTTTACTTTG
 A C G T A C G T C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.88
Offset:2
Orientation:forward strand
Alignment:AATATTTRCWTTD-
--TGTTTACTTAGG
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:AATATTTRCWTTD
--TGTTTAC----
 C T G A C T G A A C G T C T G A A C G T A C G T A C G T C T G A G A T C G C A T C G A T C G A T C G A T
A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T A C G T