Information for 15-CAATAWAATTTAT (Motif 18)

A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A C G T A C G T G C A T A C G T C G T A A C G T A C G T C T A G
p-value:1e-8
log p-value:-1.919e+01
Information Content per bp:1.866
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.6 +/- 19.4bp
Average Position of motif in Background52.0 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CAATAWAATTTAT
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CAATAWAATTTAT
AACCCAATAAAATTCG-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CAATAWAATTTAT
CTACCAATAAAATTCT-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAATAWAATTTAT
TAGGTAATAAAATTCA-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAATAWAATTTAT
CCAATAAAAA----
 A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAATAWAATTTAT
CCAATAAAAA----
 A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAATAWAATTTAT
CCAATAAAAC----
 A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAATAWAATTTAT
AAAGGTAATAAAATTT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAATAWAATTTAT
TTTAATTATAATTAAG
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAATAWAATTTAT
GCAATAAAA-----
 A C G T A G T C C G T A C G T A C G A T C G T A C G A T G T C A C G T A A C G T C G A T A C G T C G T A A C G T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T