p-value: | 1e-9 |
log p-value: | -2.154e+01 |
Information Content per bp: | 1.820 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.59% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 43.0 +/- 33.1bp |
Average Position of motif in Background | 39.7 +/- 4.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGGA- CTGGCAGNCTGCCA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGGA TWGTCTGV----- |
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ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGGCTGGTAGGA--- -RGSMTBCTGGGAAAT |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGGA CTGTCTGG----- |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTGGCTGGTAGGA NAGANTGGCGGGGNGNA |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTGGCTGGTAGGA GGTCTGGCAT------ |
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AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGGCTGGTAGGA -TGGCAGTTGG-- |
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GLI2/MA0734.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGCTGGTAGGA CAGTGTGGTCGC- |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGGCTGGTAGGA- NGTAGGTTGGCATNNN |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGCTGGTAGGA BTGABTGACAGS- |
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