Information for 8-CCCKGTGTTG (Motif 12)

A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A A G T C G T C A A T G C G T C A A C T G A C T G A C T G
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.888
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif63.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets60.4 +/- 20.9bp
Average Position of motif in Background55.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCCKGTGTTG
-CCTTTGTT-
 A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCKGTGTTG
-GCTGTG---
 A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCKGTGTTG
--CTTTGT--
 A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCKGTGTTG-
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCCKGTGTTG
NCCATTGTTC
 A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCKGTGTTG-
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCKGTGTTG
RCCATMTGTT-
 A C G T A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCCKGTGTTG-
GCACCCCTGGGTGCC
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCKGTGTTG
AGGVNCCTTTGT--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCCKGTGTTG
AACAGGTGNT-
 A C G T A G T C A G T C A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C T G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T