Information for 9-CCTGGTGGTAGGG (Motif 11)

A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
Reverse Opposite:
G A T C A G T C A G T C A G C T C G T A A G T C A G T C C G T A A T G C A G T C C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.827
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.9 +/- 16.8bp
Average Position of motif in Background49.2 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGTGGTAGGG
AACAGGTGNT----
 A C G T A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------CCTGGTGGTAGGG
TAGCGCCCCCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGTGGTAGGG--
NNANTGGTGGTCTTNNN
 A C G T A C G T A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0043.1_Max_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTGGTAGGG
TGACCACGTGGTCGGG
 A C G T A C G T A C G T A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGGTGGTAGGG
VCAGCTGBNN---
 A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-11
Orientation:forward strand
Alignment:-----------CCTGGTGGTAGGG
CNNBRGCGCCCCCTGSTGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------CCTGGTGGTAGGG
ANAGTGCCACCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCTGGTGGTAGGG--
----CAGGTAAGTAT
 A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTGGTAGGG
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTGGTGGTAGGG
CCAGCTGTTN---
 A G T C A G T C C G A T C T A G A T C G A C G T A C T G A C T G A C G T C T G A T A C G A C T G C T A G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T