Information for 2-CTGCGCGAGCTGC (Motif 5)

A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C
Reverse Opposite:
A T C G G T A C C G T A A C T G A T G C A G C T A T G C A T C G A T G C T C A G G T A C G T C A A T C G
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.760
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif424.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets54.2 +/- 23.7bp
Average Position of motif in Background48.2 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCGCGAGCTGC
NNGCNCTGCGCGGC----
 A C G T A C G T A C G T A C G T A C G T A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGCGCGAGCTGC-----
-CTCAGCAGCTGCTACTG
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGCGCGAGCTGC-
--NNVVCAGCTGBN
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTGCGCGAGCTGC---
----GCCAGCTGBTNB
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCGCGAGCTGC-
-NGNGACAGCTGCN
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGCGCGAGCTGC-
---NNGCAGCTGTC
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T
A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGCGCGAGCTGC-
--NNAGCAGCTGCT
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTGCGCGAGCTGC--
-----NCAGCTGCTG
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGCGCGAGCTGC
---NNACAGCTGC
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTGCGCGAGCTGC--
-----CCAGCTGTTN
 A T G C C A G T A C T G A G T C A T C G A T G C T A C G C T G A T A C G T G A C C G A T A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A