Information for 9-GCSGCGGCCG (Motif 15)

T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G
Reverse Opposite:
T A G C T C A G A C T G A T G C A T G C A C T G A G T C T A G C A T C G A G T C
p-value:1e-4
log p-value:-9.990e+00
Information Content per bp:1.797
Number of Target Sequences with motif161.0
Percentage of Target Sequences with motif22.71%
Number of Background Sequences with motif8276.4
Percentage of Background Sequences with motif16.92%
Average Position of motif in Targets47.8 +/- 25.5bp
Average Position of motif in Background50.5 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCSGCGGCCG-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCSGCGGCCG
CGCAGCTGCG-
 A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCSGCGGCCG-----
GGNGCGNCTGTTNNN
 T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCSGCGGCCG-
AGCAGCTGCTNN
 A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCSGCGGCCG
NCGCGGACGTTG
 A C G T A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCSGCGGCCG-
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCSGCGGCCG
AGCAGCTGCT-
 A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCSGCGGCCG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCSGCGGCCG-
CAGGCCNNGGCCNN
 A C G T A C G T A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCSGCGGCCG---
GGCGGGGGCGGGGG
 A C G T T C A G T A G C A T C G A C T G A G T C A T C G A T C G A G T C A G T C A T C G A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G