Information for 1-GCCCCGGCGCTGGCAW (Motif 1)

A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
Reverse Opposite:
G C A T C A G T A T C G A T G C A G T C C G T A A C T G A G T C A T C G A T G C A G T C A C T G A T C G A C T G A T C G A G T C
p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.806
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif48.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets42.1 +/- 21.2bp
Average Position of motif in Background47.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGGCGCTGGCAW
TGCCCCCGGGCA-----
 A C G T A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGGCGCTGGCAW
TGCCCCAGGGCA-----
 A C G T A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGGCGCTGGCAW
TGCCCCAGGGCA-----
 A C G T A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGGCGCTGGCAW
CCGCCCAAGGGCAG----
 A C G T A C G T A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGGCGCTGGCAW
TTGCCCTAGGGCAT----
 A C G T A C G T A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCCCGGCGCTGGCAW
GACCCCCCGCTGTG--
 A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCCGGCGCTGGCAW
GACCCCCCGCTGCGC-
 A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCCCGGCGCTGGCAW
GCCTCAGGGCAT----
 A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGGCGCTGGCAW
TCACCTCTGGGCAG----
 A C G T A C G T A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGGCGCTGGCAW
TCCGCCCCCGCATT-----
 A C G T A C G T A C G T A C T G A T G C A G T C A T G C A G T C T C A G A T C G A T G C A C T G A G T C A C G T A C T G A T C G A T G C G T C A C G A T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T