Information for 6-TCARGASMWMMAMAMW (Motif 7)

A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
Reverse Opposite:
C G A T A C G T A C G T A C T G A C G T A C T G A C G T C G A T A C T G A T C G A C G T A G T C A G C T A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.779
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.0 +/- 17.7bp
Average Position of motif in Background50.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCARGASMWMMAMAMW---
--AACACCAAAACAAAGGA
 A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TCARGASMWMMAMAMW
GGTCACGTGG--------
 A C G T A C G T A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCARGASMWMMAMAMW
NACAGGAAAT-------
 A C G T A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:TCARGASMWMMAMAMW
----------AACAAT
 A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TCARGASMWMMAMAMW
NTCAAGGTCA-------
 A C G T A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TCARGASMWMMAMAMW
CGTCTAGACA--------
 A C G T A C G T A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TCARGASMWMMAMAMW-
--CAAACAACAACACCT
 A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A A C G T
A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----TCARGASMWMMAMAMW
CTGAGTCAGCAATTT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TCARGASMWMMAMAMW
NACAGGAAAT-------
 A C G T A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TCARGASMWMMAMAMW-
--CAAAAGTAAACAAAG
 A C G T A G T C C G T A T C A G A C T G C G T A T A C G G T A C C G T A T G A C G T A C C G T A G T A C C G T A G T C A C G T A A C G T
A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G