Information for 25-TATATAGGTTTAT (Motif 52)

A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T C G T A
p-value:1e0
log p-value:-4.867e-02
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif20.51%
Number of Background Sequences with motif14326.1
Percentage of Background Sequences with motif31.27%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background50.1 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT2/MA0756.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TATATAGGTTTAT-
ATTATCGATTTTTT
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TATATAGGTTTAT
ATGGGATATATCCGCCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TATATAGGTTTAT-
NTTATTGATTTTTT
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATATAGGTTTAT-
ANTATCGATTTTTN
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------TATATAGGTTTAT
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------TATATAGGTTTAT
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TATATAGGTTTAT----
-----DGWTTTATGRCN
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TATATAGGTTTAT-
AYATGYATATGCATR
 A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TATATAGGTTTAT---
-------TTTTATTGC
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TATATAGGTTTAT----
-----NTGTTTAYATWW
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A