Information for 5-TAATTTTTAAAAAAAA (Motif 5)

C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A
Reverse Opposite:
A G C T C A G T A C G T A G C T A C G T A C G T A C G T G A C T G T C A C G T A C T G A C G T A T C G A A C G T G A C T C G T A
p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.794
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.26%
Number of Background Sequences with motif37.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.5 +/- 16.7bp
Average Position of motif in Background55.5 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA----
---GTTAAAAAAAAAAATTA
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA-
---TACTGGAAAAAAAA
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A A C G T
A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA
-AAATAAGAAAAAAC-
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA-----
----GTTCAAAAAAAAAATTC
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA
--AATATTAATAAAGA
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A
A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA
-CGGTTTCAAA-----
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TAATTTTTAAAAAAAA
TTCAATTGTTCTAAAA--
 A C G T A C G T C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA-
--CAATTGCAAAAATAT
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TAATTTTTAAAAAAAA
----ATTTGAATT---
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TAATTTTTAAAAAAAA--
-NNNTTTTAATTAANNNN
 C G A T C T G A C G T A A G C T A C G T A G C T A C G T C A G T C T G A C G T A C G T A C G T A C T G A C G T A G T C A C T G A A C G T A C G T
A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C