Information for 24-AGGGCATAAT (Motif 49)

C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C G T A C T G A G T C A G T C A G T C A C G T
p-value:1e-2
log p-value:-6.376e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background42.0 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCATAAT
NGTGGGCAT---
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGGCATAAT----
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGGCATAAT--
ARGAGGMCAAAATGW
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGGCATAAT
TRAGGTCA----
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGCATAAT-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGGCATAAT----
TGAAGGGATTAATCATC
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGGCATAAT----
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGGCATAAT------
-TATCATAATTAAGGA
 C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCATAAT
TNNGGGCAG---
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGGCATAAT----
AATAGGGTATCATATAT
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T