Information for 19-TGAATGATCC (Motif 46)

A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A G T C C G T A A C G T A C G T A G T C C G T A
p-value:1e-2
log p-value:-6.376e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background43.0 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGAATGATCC--
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGAATGATCC-
---ATAATCCC
 A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TGAATGATCC--
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGAATGATCC
TTTGATTGATGN
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAATGATCC--
TGAATTATGCAT
 A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATGATCC
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGAATGATCC--
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGAATGATCC--
TCATGAATWATTCAT
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAATGATCC
GATGAGTCATCC
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGAATGATCC
NTGAGTCATCN
 A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C