Information for 16-ATGCATCACG (Motif 44)

C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G C G T A A C G T A C T G A G T C C G T A A C G T
p-value:1e-2
log p-value:-6.376e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets16.0 +/- 0.0bp
Average Position of motif in Background75.8 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATGCATCACG
ATTGCATCAK-
 A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATGCATCACG
GYCATCMATCAT-
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATGCATCACG
ATTGCATCAT-
 A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGCATCACG
TTGCAACATN
 C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATGCATCACG--
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGCATCACG
AATGTATCAAT
 A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATGCATCACG---
---GGTCACGTGG
 C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGCATCACG
TCATCAATCA--
 A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGCATCACG
GHATATKCAT----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGCATCACG-
TATTGCATCATCC
 A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A G T C A C T G A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C