Information for 25-AACCATTCTTAGATTA (Motif 40)

C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
p-value:1e-3
log p-value:-7.069e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AACCATTCTTAGATTA
--CCATTGTTYB----
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AACCATTCTTAGATTA
-TCTATTTTTAGA---
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AACCATTCTTAGATTA
-----TAATTAAATTA
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AACCATTCTTAGATTA
----TTTCTNAGAAAN
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

PHOX2A/MA0713.1/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AACCATTCTTAGATTA
-----TAATTAAATTA
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AACCATTCTTAGATTA
-----TAATTAAATTA
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----AACCATTCTTAGATTA
TNCNNAACAATTTTTNC----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AACCATTCTTAGATTA
-TCTATTTATAGN---
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AACCATTCTTAGATTA
--CTATTTTTGG----
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AACCATTCTTAGATTA
--CCATTGTTC-----
 C G T A C G T A A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T