Information for 20-GCGGGCGAATCCGCAA (Motif 37)

A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C T G A C T G C G T A A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C T G A G T C
p-value:1e-3
log p-value:-7.069e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGGGCGAATCCGCAA
--GGGGGAATCCCC--
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A
A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGGGCGAATCCGCAA--
--AGGCTAATCCCCAANG
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCGGGCGAATCCGCAA-
-----SSAATCCACANN
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCGGGCGAATCCGCAA
----GCGCATGCGCAC
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCGGGCGAATCCGCAA
-------AAACCGCAA
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCGGGCGAATCCGCAA
----TCCAATCCACA-
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCGGGCGAATCCGCAA-
-------AAACCGCAAA
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCGGGCGAATCCGCAA--
----TCGAAACCGAAACT
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCGGGCGAATCCGCAA
----GCGCATGCGCAG
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NFKB2/MA0778.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCGGGCGAATCCGCAA
--AGGGGAATCCCCT-
 A C T G A G T C A C T G A C T G A C T G A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C T G A G T C C G T A C G T A
A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T