Information for 3-MGMAGRAGTWAWKTSR (Motif 3)

G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
Reverse Opposite:
A G C T A T G C C G T A G T A C C G T A A C G T C G T A C G T A A G T C A C G T A G T C A G T C A G C T A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.308e+01
Information Content per bp:1.804
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 32.6bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:MGMAGRAGTWAWKTSR
---AAAAGTCAA----
 G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--MGMAGRAGTWAWKTSR
NTNNNAGGAGTCTCNTN-
 A C G T A C G T G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

ETV6/MA0645.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MGMAGRAGTWAWKTSR
AGCGGAAGTG------
 G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---MGMAGRAGTWAWKTSR
TTAAGAGGAAGTTA-----
 A C G T A C G T A C G T G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:MGMAGRAGTWAWKTSR----
---ANNAGTTAATTAGTTAN
 G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:MGMAGRAGTWAWKTSR
---AGGTGTTAAT---
 G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----MGMAGRAGTWAWKTSR
AAAAAGCGGAAGTA------
 A C G T A C G T A C G T A C G T G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:MGMAGRAGTWAWKTSR
--TAGGTGTGAAG---
 G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:MGMAGRAGTWAWKTSR
AGAGGAAGTG------
 G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:MGMAGRAGTWAWKTSR
---AGGTGTGA-----
 G T C A A C T G G T C A C T G A C T A G C T A G C G T A A C T G A C G T C G A T C G T A C G A T A C T G A C G T A T C G C T G A
A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T