Information for 19-CAWWYWTGAAGGTCCT (Motif 29)

A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G G C T A A T G C A G T C A G C T A C G T G T A C C T G A C G T A C T A G G C A T G C A T C G A T T A C G
p-value:1e-3
log p-value:-7.942e+00
Information Content per bp:1.595
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.0 +/- 10.0bp
Average Position of motif in Background53.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAWWYWTGAAGGTCCT------
-----TTCNAAGTACTTNNNNN
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAWWYWTGAAGGTCCT-----
----NATTTAAGTACTTANNA
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAWWYWTGAAGGTCCT------
-----TTTTAAGTACTTAAATT
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAWWYWTGAAGGTCCT-----
-----CTTTAAGTACTTAATG
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.50
Offset:10
Orientation:forward strand
Alignment:CAWWYWTGAAGGTCCT--
----------AGGCCTNG
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CAWWYWTGAAGGTCCT
----CATGCGGGTAC-
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.49
Offset:10
Orientation:forward strand
Alignment:CAWWYWTGAAGGTCCT--
----------AGGCCTAG
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.47
Offset:9
Orientation:forward strand
Alignment:CAWWYWTGAAGGTCCT---
---------CNGTCCTCCC
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.47
Offset:9
Orientation:forward strand
Alignment:CAWWYWTGAAGGTCCT---
---------AAGCACTTAA
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CAWWYWTGAAGGTCCT-
-NNNNATGCGGGTNNNN
 A T G C G C T A C G T A C G A T G A T C G C A T G A C T A C T G G T C A C T G A C T A G A T C G C A G T G T A C A G T C A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A