Information for 15-ATTTAGATAVAATAAA (Motif 23)

C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T C G A T G T C A A C G T A C G T A C G T A G C T C G T A A C G T A T G C C G A T C G T A C G T A G T C A C G A T
p-value:1e-5
log p-value:-1.175e+01
Information Content per bp:1.754
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif44.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.7 +/- 20.8bp
Average Position of motif in Background56.5 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0083.1_Tcf7_1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA--
-TATAGATCAAAGGAAAA
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATTTAGATAVAATAAA
ATTTGCATACAATGG-
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:3
Score:0.56
Offset:8
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA--
--------GCAATAAAAA
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA--
-TATAGATCAAAGGAAAA
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA----
----ACCGGCAATTAATAAA
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA-
--------GCAATAAAA
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

LMX1B/MA0703.1/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA
--------TTAATTAA
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A

Hmx3/MA0898.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA-----
----ACAAGCAATTAAAGAAT
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA-----
----ACAAGCAATTAAAGAAT
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATTTAGATAVAATAAA-----
----ACAAGCAATTAAAGAAT
 C G T A A C G T C G A T A C G T C G T A A T C G G T C A C G A T C T G A T C G A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T