Information for 9-KKSAMRACAWRTR (Motif 21)

A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G
Reverse Opposite:
A G T C C G T A A G C T C G A T A C G T A C T G A C G T A G C T A C T G A C G T A T G C G T C A G T A C
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.778
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif39.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets15.3 +/- 9.7bp
Average Position of motif in Background46.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:KKSAMRACAWRTR--
-----NACATATGGN
 A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-KKSAMRACAWRTR--
ATTTACGACAAATAGC
 A C G T A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:KKSAMRACAWRTR--
-----AACATATGTC
 A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---KKSAMRACAWRTR-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:KKSAMRACAWRTR--
-----AACATATGTT
 A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:KKSAMRACAWRTR-
------ACATATGG
 A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

BHLHE23/MA0817.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:KKSAMRACAWRTR---
----AAACATATGTTT
 A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KKSAMRACAWRTR
NTTNAGAACAATTA
 A C G T A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--KKSAMRACAWRTR
ATGTCACAACAACAC
 A C G T A C G T A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

OLIG1/MA0826.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:KKSAMRACAWRTR--
-----AACATATGTT
 A C T G A C G T A T C G C G T A G T A C C T G A C G T A A G T C C G T A C G T A C T G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T